Index

A

ADABADAM::MemoryBuffer (C++ struct) ADABADAM::MemoryBuffer::Analysis (C++ member) ADABADAM::MemoryBuffer::AnalysisSize (C++ member) ADABADAM::MemoryBuffer::AnalysisSteps (C++ member) ADABADAM::MemoryBuffer::Batches (C++ member) ADABADAM::MemoryBuffer::DXs (C++ member) ADABADAM::MemoryBuffer::Epochs (C++ member) ADABADAM::MemoryBuffer::Fs (C++ member) ADABADAM::MemoryBuffer::Gradnorms (C++ member) ADABADAM::MemoryBuffer::LastSaveTime (C++ member) ADABADAM::MemoryBuffer::MiniBatches (C++ member) ADABADAM::MemoryBuffer::OverrideTime (C++ member) ADABADAM::MemoryBuffer::Position (C++ member) ADABADAM::MemoryBuffer::Size (C++ member) ADABADAM::MemoryBuffer::StartTime (C++ member) ADABADAM::MemoryBuffer::Times (C++ member) ADABADAM::Optimizer (C++ class) ADABADAM::Optimizer::ADABADAM_Body (C++ function) ADABADAM::Optimizer::Buffer (C++ member) ADABADAM::Optimizer::CheckConvergence (C++ function) ADABADAM::Optimizer::CheckExternalFiles (C++ function) ADABADAM::Optimizer::CheckMinibatches (C++ function) ADABADAM::Optimizer::CleanExternalFiles (C++ function) ADABADAM::Optimizer::Functor (C++ member) ADABADAM::Optimizer::GetStatus (C++ function) ADABADAM::Optimizer::HaltConditions (C++ member) ADABADAM::Optimizer::Initialise (C++ function) ADABADAM::Optimizer::InitialiseExternalFiles (C++ function) ADABADAM::Optimizer::InitialiseSpeedControls (C++ function) ADABADAM::Optimizer::Minimize (C++ function) ADABADAM::Optimizer::NeedsBatchReduction (C++ function) ADABADAM::Optimizer::Optimizer (C++ function) ADABADAM::Optimizer::Progress (C++ member) ADABADAM::Optimizer::Properties (C++ member) ADABADAM::Optimizer::SaveProgress (C++ function) ADABADAM::Optimizer::SetDefaults (C++ function) ADABADAM::Optimizer::Status (C++ member) ADABADAM::Optimizer::UpdateProgress (C++ function)

ADABADAM::OptimizerProperties (C++ struct) ADABADAM::OptimizerProperties::HarnessReleaseSteps (C++ member) ADABADAM::OptimizerProperties::MaxHarnessFactor (C++ member) ADABADAM::OptimizerProperties::MinibatchDownStep (C++ member) ADABADAM::OptimizerProperties::MiniBatches (C++ member) ADABADAM::OptimizerProperties::StepSize (C++ member) ADABADAM::OptimizerStatus (C++ struct) ADABADAM::OptimizerStatus::CarryingOnRegardless (C++ member) ADABADAM::OptimizerStatus::Continues (C++ member) ADABADAM::OptimizerStatus::Converged (C++ member) ADABADAM::OptimizerStatus::ExternalDownStep (C++ member) ADABADAM::OptimizerStatus::ExternalTermination (C++ member) ADABADAM::OptimizerStatus::ReachedFunctionConvergence (C++ member) ADABADAM::OptimizerStatus::ReachedGradConvergence (C++ member) ADABADAM::OptimizerStatus::ReachedStepConvergence (C++ member) ADABADAM::OptimizerStatus::TooManySteps (C++ member) ADABADAM::ProgressTracker (C++ struct) ADABADAM::ProgressTracker::BufferFileOpened (C++ member) ADABADAM::ProgressTracker::CurrentSteps (C++ member) ADABADAM::ProgressTracker::Harness (C++ member) ADABADAM::ProgressTracker::Hashes (C++ member) ADABADAM::ProgressTracker::MaxHashes (C++ member) ADABADAM::ProgressTracker::MovingAverage (C++ member) ADABADAM::ProgressTracker::SaveLocation (C++ member) ADABADAM::ProgressTracker::SlowdownTriggers (C++ member) ADABADAM::ProgressTracker::SpeedController (C++ member) ADABADAM::ProgressTracker::StepsPerPositionSave (C++ member) ADABADAM::ProgressTracker::TimeSinceSingleBatch (C++ member) ADABADAM::ProgressTracker::UniquePositionSaves (C++ member) ADABADAM::StopConditions (C++ struct) ADABADAM::StopConditions::DownStepFile (C++ member) ADABADAM::StopConditions::FunctionChangeThreshold (C++ member) ADABADAM::StopConditions::GradientThreshold (C++ member) ADABADAM::StopConditions::MaxSteps (C++ member) ADABADAM::StopConditions::PositionChangeThreshold (C++ member) ADABADAM::StopConditions::SingleBatchStepThreshold (C++ member) ADABADAM::StopConditions::TerminationFile (C++ member) ADABADAM::StopConditions::UseExternalInstructions (C++ member)

C

CalculateBatches (C++ function) choleskyTolerance (C++ member) CommandArgs (C++ class) CommandArgs::argPointers (C++ member) CommandArgs::CommandArgs (C++ function) CommandArgs::DataSource (C++ member) CommandArgs::GradLim (C++ member) CommandArgs::HarnessRelease (C++ member)

CommandArgs::HarnessSlowDown (C++ member) CommandArgs::MaxSteps (C++ member) CommandArgs::Minibatches (C++ member) CommandArgs::OutputDirectory (C++ member) CommandArgs::RandomSeed (C++ member) CommandArgs::ReadArguments (C++ function) CommandArgs::SaveAllSteps (C++ member) CommandArgs::SaveSteps (C++ member) CommandArgs::StartVectorLocation (C++ member)

D

DataLoadCount (C++ member)

E

EfficiencyVector (C++ class) EfficiencyVector::Access (C++ function), [1] EfficiencyVector::Assign (C++ function), [1] EfficiencyVector::BackwardTransform (C++ function) EfficiencyVector::BackwardTransform_Hyper (C++ function) EfficiencyVector::BackwardTransform_Spatial (C++ function) EfficiencyVector::BackwardTransform_Temporal (C++ function) EfficiencyVector::bVector (C++ member) EfficiencyVector::cholesky_u (C++ member) EfficiencyVector::cholesky_v (C++ member) EfficiencyVector::cholesky_w (C++ member) EfficiencyVector::choleskyN (C++ member) EfficiencyVector::EfficiencyVector (C++ function), [1], [2] EfficiencyVector::ForwardTransform (C++ function) EfficiencyVector::ForwardTransform_Hyper (C++ function) EfficiencyVector::ForwardTransform_Spatial (C++ function) EfficiencyVector::ForwardTransform_Temporal (C++ function) EfficiencyVector::GenerateVector (C++ function) EfficiencyVector::Increment (C++ function), [1] EfficiencyVector::LoadCholesky (C++ function) EfficiencyVector::LoadNeedlets (C++ function) EfficiencyVector::LoadVector (C++ function) EfficiencyVector::needlet_u (C++ member)

EfficiencyVector::needlet_v (C++ member) EfficiencyVector::needlet_w (C++ member) EfficiencyVector::needletN (C++ member) EfficiencyVector::RawGradient (C++ member) EfficiencyVector::RawPosition (C++ member) EfficiencyVector::Reset (C++ function) EfficiencyVector::Save (C++ function) EfficiencyVector::SaveLocation (C++ member) EfficiencyVector::TransformedGradient (C++ member) EfficiencyVector::TransformedPosition (C++ member) EfficiencyVector::VectorComponent (C++ enum) EfficiencyVector::VectorComponent::Hyper (C++ enumerator) EfficiencyVector::VectorComponent::Spatial (C++ enumerator) EfficiencyVector::VectorComponent::Temporal (C++ enumerator) EfficiencyVector::VectorMode (C++ enum) EfficiencyVector::VectorMode::Raw (C++ enumerator) EfficiencyVector::VectorMode::Transformed (C++ enumerator) EfficiencyVector::VectorType (C++ enum) EfficiencyVector::VectorType::Gradient (C++ enumerator) EfficiencyVector::VectorType::Position (C++ enumerator) elu (C++ function) elu_grad (C++ function) elu_transitionPoint (C++ member) exp_elu_transitionPoint (C++ member)

F

F_dF (C++ struct) F_dF::dF (C++ member) F_dF::F (C++ member) F_dF::F_dF (C++ function), [1] File (C++ struct)

File::Bin (C++ member) File::Name (C++ member) FileStarPairs (C++ struct) FileStarPairs::FileName (C++ member) FileStarPairs::NStars (C++ member)

G

GapList (C++ member) gapPriorAlpha (C++ member)

gapPriorBeta (C++ member) gapPriorPeak (C++ member) GetAssignments (C++ function)

H

healpix_order (C++ member)

hyperFractionOffset (C++ member) hyperOrder (C++ member)

I

initialisationBounds (C++ member)

L

LikelihoodData (C++ class) LikelihoodData::dfdN_constantP (C++ member) LikelihoodData::dfdp_constantN (C++ member) LikelihoodData::GeneratePopulations (C++ function) LikelihoodData::grad_elu_xml1 (C++ member) LikelihoodData::grad_elu_xml2 (C++ member) LikelihoodData::healpix_fov_1 (C++ member) LikelihoodData::healpix_fov_2 (C++ member) LikelihoodData::hypergradient (C++ member) LikelihoodData::LikelihoodData (C++ function) LikelihoodData::Mode (C++ member) LikelihoodData::p (C++ member) LikelihoodData::pmf_backward (C++ member) LikelihoodData::pmf_forward (C++ member) LikelihoodData::pml (C++ member) LikelihoodData::pt (C++ member) LikelihoodData::Stars (C++ member) LikelihoodData::subpmf (C++ member) LikelihoodData::time_mapping (C++ member) LikelihoodData::VariancePopulations (C++ member) LikelihoodFunctor (C++ class) LikelihoodFunctor::Calculate (C++ function), [1] LikelihoodFunctor::Efficiency (C++ member) LikelihoodFunctor::Gradient (C++ member) LikelihoodFunctor::Initialise (C++ function) LikelihoodFunctor::L (C++ member) LikelihoodFunctor::LikelihoodFunctor (C++ function)

LikelihoodFunctor::LoopID (C++ member) LikelihoodFunctor::MaxBatches (C++ member) LikelihoodFunctor::SavePosition (C++ function) LikelihoodFunctor::Value (C++ member) lm (C++ member) LoadData (C++ function) log_add_exp (C++ function) LogLikelihood (C++ class) LogLikelihood::AssignGradients (C++ function) LogLikelihood::Calculate (C++ function) LogLikelihood::Data (C++ member) LogLikelihood::ExactPoissonContribution (C++ function) LogLikelihood::GenerateContribution (C++ function) LogLikelihood::GeneratePs (C++ function) LogLikelihood::Gradient (C++ member) LogLikelihood::LogLikelihood (C++ function) LogLikelihood::NormalContribution (C++ function) LogLikelihood::PerStarContribution (C++ function) LogLikelihood::PoissonContribution (C++ function) LogLikelihood::Reset (C++ function) LogLikelihood::StarsUsed (C++ member) LogLikelihood::Value (C++ member) LogLikelihoodPrior (C++ class) LogLikelihoodPrior::LogLikelihoodPrior (C++ function) LogLikelihoodPrior::RawPrior (C++ function) LogLikelihoodPrior::TransformPrior (C++ function) lt (C++ member) lt_revs (C++ member)

M

magOffset (C++ member)

N

needlet_order (C++ member) NHyper (C++ member) Nl (C++ member) Nm (C++ member)

Normal (C++ function) Ns (C++ member) Nt (C++ member) NumberLargerThanMaxObservations (C++ member) NVariancePops (C++ member)

P

PipelineMinVisits (C++ member) poisson_binomial_lpmf_backward (C++ function) poisson_binomial_lpmf_forward (C++ function) poisson_binomial_normal_lpmf (C++ function)

poisson_binomial_pmf_backward (C++ function) poisson_binomial_pmf_forward (C++ function) poisson_binomial_sublpmf (C++ function) poisson_binomial_subpmf (C++ function)

R

rawNonHyperParams (C++ member)

RootID (C++ member)

S

ScalingMode (C++ member) secondsPerNtStep (C++ member) sigmat (C++ member) sigmoid (C++ function) SingularityPreventer (C++ member) spatialAddingPrefactor (C++ member) Star (C++ class)

Star::gBin (C++ member) Star::nMeasure (C++ member) Star::nVisit (C++ member) Star::Star (C++ function) Star::TimeSeries (C++ member) studentNu (C++ member) StudentT (C++ function)

T

TempDirName (C++ member) TemporalBetaPrior (C++ function)

totalRawParams (C++ member) TotalScanningTime (C++ member) totalTransformedParams (C++ member)

V

VariancePopulation (C++ struct) VariancePopulation::dVariancedAlpha (C++ function) VariancePopulation::dVariancedN (C++ function) VariancePopulation::Fraction (C++ member) VariancePopulation::Term (C++ member) VariancePopulation::Variance (C++ function)

VariancePopulation::VariancePopulation (C++ function), [1] VarianceScaling (C++ enum) VarianceScaling::ActiveNScaling (C++ enumerator) VarianceScaling::MScaling (C++ enumerator) VarianceScaling::NScaling (C++ enumerator) VerySmallLog (C++ member) VerySmallNumber (C++ member)

X

xmInitialised (C++ member)

xmPrior (C++ member) xtPrior (C++ member)